RE: Perform streaming logical transactions by background workers and parallel apply

Zhijie Hou (Fujitsu) <houzj.fnst@fujitsu.com>

From: "houzj.fnst@fujitsu.com" <houzj.fnst@fujitsu.com>
To: Masahiko Sawada <sawada.mshk@gmail.com>, Amit Kapila <amit.kapila16@gmail.com>
Cc: "wangw.fnst@fujitsu.com" <wangw.fnst@fujitsu.com>, Peter Smith <smithpb2250@gmail.com>, Dilip Kumar <dilipbalaut@gmail.com>, "shiy.fnst@fujitsu.com" <shiy.fnst@fujitsu.com>, PostgreSQL Hackers <pgsql-hackers@lists.postgresql.org>
Date: 2022-11-03T13:06:35Z
Lists: pgsql-hackers

Attachments

On Wednesday, November 2, 2022 10:50 AM Masahiko Sawada <sawada.mshk@gmail.com> wrote:
> 
> On Mon, Oct 24, 2022 at 8:42 PM Masahiko Sawada
> <sawada.mshk@gmail.com> wrote:
> >
> > On Wed, Oct 12, 2022 at 3:04 PM Amit Kapila <amit.kapila16@gmail.com>
> wrote:
> > >
> > > On Tue, Oct 11, 2022 at 5:52 AM Masahiko Sawada
> <sawada.mshk@gmail.com> wrote:
> > > >
> > > > On Fri, Oct 7, 2022 at 2:00 PM Amit Kapila <amit.kapila16@gmail.com>
> wrote:
> > > > >
> > > > > About your point that having different partition structures for
> > > > > publisher and subscriber, I don't know how common it will be once we
> > > > > have DDL replication. Also, the default value of
> > > > > publish_via_partition_root is false which doesn't seem to indicate
> > > > > that this is a quite common case.
> > > >
> > > > So how can we consider these concurrent issues that could happen only
> > > > when streaming = 'parallel'? Can we restrict some use cases to avoid
> > > > the problem or can we have a safeguard against these conflicts?
> > > >
> > >
> > > Yeah, right now the strategy is to disallow parallel apply for such
> > > cases as you can see in *0003* patch.
> >
> > Tightening the restrictions could work in some cases but there might
> > still be coner cases and it could reduce the usability. I'm not really
> > sure that we can ensure such a deadlock won't happen with the current
> > restrictions. I think we need something safeguard just in case. For
> > example, if the leader apply worker is waiting for a lock acquired by
> > its parallel worker, it cancels the parallel worker's transaction,
> > commits its transaction, and restarts logical replication. Or the
> > leader can log the deadlock to let the user know.
> >
> 
> As another direction, we could make the parallel apply feature robust
> if we can detect deadlocks that happen among the leader worker and
> parallel workers. I'd like to summarize the idea discussed off-list
> (with Amit, Hou-San, and Kuroda-San) for discussion. The basic idea is
> that when the leader worker or parallel worker needs to wait for
> something (eg. transaction completion, messages) we use lmgr
> functionality so that we can create wait-for edges and detect
> deadlocks in lmgr.
> 
> For example, a scenario where a deadlock occurs is the following:
> 
> [Publisher]
> create table tab1(a int);
> create publication pub for table tab1;
> 
> [Subcriber]
> creat table tab1(a int primary key);
> create subscription sub connection 'port=10000 dbname=postgres'
> publication pub with (streaming = parallel);
> 
> TX1:
> BEGIN;
> INSERT INTO tab1 SELECT i FROM generate_series(1, 5000) s(i); -- streamed
>     Tx2:
>     BEGIN;
>     INSERT INTO tab1 SELECT i FROM generate_series(1, 5000) s(i); -- streamed
>     COMMIT;
> COMMIT;
> 
> Suppose a parallel apply worker (PA-1) is executing TX-1 and the
> leader apply worker (LA) is executing TX-2 concurrently on the
> subscriber. Now, LA is waiting for PA-1 because of the unique key of
> tab1 while PA-1 is waiting for LA to send further messages. There is a
> deadlock between PA-1 and LA but lmgr cannot detect it.
> 
> One idea to resolve this issue is that we have LA acquire a session
> lock on a shared object (by LockSharedObjectForSession()) and have
> PA-1 wait on the lock before trying to receive messages. IOW,  LA
> acquires the lock before sending STREAM_STOP and releases it if
> already acquired before sending STREAM_START, STREAM_PREPARE and
> STREAM_COMMIT. For PA-1, it always needs to acquire the lock after
> processing STREAM_STOP and then release immediately after acquiring
> it. That way, when PA-1 is waiting for LA, we can have a wait-edge
> from PA-1 to LA in lmgr, which will make a deadlock in lmgr like:
> 
> LA (waiting to acquire lock) -> PA-1 (waiting to acquire the shared
> object) -> LA
> 
> We would need the shared objects per parallel apply worker.
> 
> After detecting a deadlock, we can restart logical replication with
> temporarily disabling the parallel apply, which is done by 0005 patch.
> 
> Another scenario is similar to the previous case but TX-1 and TX-2 are
> executed by two parallel apply workers (PA-1 and PA-2 respectively).
> In this scenario, PA-2 is waiting for PA-1 to complete its transaction
> while PA-1 is waiting for subsequent input from LA. Also, LA is
> waiting for PA-2 to complete its transaction in order to preserve the
> commit order. There is a deadlock among three processes but it cannot
> be detected in lmgr because the fact that LA is waiting for PA-2 to
> complete its transaction doesn't appear in lmgr (see
> parallel_apply_wait_for_xact_finish()). To fix it, we can use
> XactLockTableWait() instead.
> 
> However, since XactLockTableWait() considers PREPARED TRANSACTION as
> still in progress, probably we need a similar trick as above in case
> where a transaction is prepared. For example, suppose that TX-2 was
> prepared instead of committed in the above scenario, PA-2 acquires
> another shared lock at START_STREAM and releases it at
> STREAM_COMMIT/PREPARE. LA can wait on the lock.
> 
> Yet another scenario where LA has to wait is the case where the shm_mq
> buffer is full. In the above scenario (ie. PA-1 and PA-2 are executing
> transactions concurrently), if  the shm_mq buffer between LA and PA-2
> is full, LA has to wait to send messages, and this wait doesn't appear
> in lmgr. To fix it, probably we have to use non-blocking write and
> wait with a timeout. If timeout is exceeded, the LA will write to file
> and indicate PA-2 that it needs to read file for remaining messages.
> Then LA will start waiting for commit which will detect deadlock if
> any.
> 
> If we can detect deadlocks by having such a functionality or some
> other way then we don't need to tighten the restrictions of subscribed
> tables' schemas etc.

Thanks for the analysis and summary !

I tried to implement the above idea and here is the patch set. I have done some
basic tests for the new codes and it work fine. But I am going to test some
conner cases to make sure all the codes work fine. I removed the old 0003 patch
which was used to check the parallel apply safety because now we can detect the
deadlock problem.

Besides, there are few tasks left which I will handle soon and update the patch set:

* Address previous comment from Amit[1], Shi-san[2] and Peter[3] (Already done but haven't merged them).
* Rebase the original 0005 patch which is "retry to apply streaming xact only in leader apply worker".
* Adjust some comments and documentation related to new codes.

[1] https://www.postgresql.org/message-id/CAA4eK1Lsn%3D_gz1-3LqZ-wEDQDmChUsOX8LvHS8WV39wC1iRR%3DQ%40mail.gmail.com
[2] https://www.postgresql.org/message-id/OSZPR01MB631042582805A8E8615BC413FD329%40OSZPR01MB6310.jpnprd01.prod.outlook.com
[3] https://www.postgresql.org/message-id/CAHut%2BPsJWHRoRzXtMrJ1RaxmkS2LkiMR_4S2pSionxXmYsyOww%40mail.gmail.com

Best regards,
Hou zj

Commits

Same data as JSON: GET /api/v1/messages/:b64id/commits the thread's linked commits as JSON, with link sources. API reference →
  1. Fix invalid memory access during the shutdown of the parallel apply worker.

  2. Fix assertion failure in apply worker.

  3. Use elog to report unexpected action in handle_streamed_transaction().

  4. Use appropriate wait event when sending data in the apply worker.

  5. Allow the logical_replication_mode to be used on the subscriber.

  6. Rename GUC logical_decoding_mode to logical_replication_mode.

  7. Display the leader apply worker's PID for parallel apply workers.

  8. Improve the code to decide and process the apply action.

  9. Document the newly added wait events added by commit 216a784829.

  10. Perform apply of large transactions by parallel workers.

  11. Wake up a subscription's replication worker processes after DDL.

  12. Add copyright notices to meson files

  13. Better document logical replication parameters

  14. Add a common function to generate the origin name.

  15. Harmonize parameter names in storage and AM code.

  16. Avoid using list_length() to test for empty list.

  17. Improve two comments related to a boolean DefElem's value

  18. Fix partition table's REPLICA IDENTITY checking on the subscriber.

  19. Fix data inconsistency between publisher and subscriber.

  20. Fix cache look-up failures while applying changes in logical replication.