Re: PATCH: logical_work_mem and logical streaming of large in-progress transactions

Dilip Kumar <dilipbalaut@gmail.com>

From: Dilip Kumar <dilipbalaut@gmail.com>
To: Amit Kapila <amit.kapila16@gmail.com>
Cc: Michael Paquier <michael@paquier.xyz>, Tomas Vondra <tomas.vondra@2ndquadrant.com>, Peter Eisentraut <peter.eisentraut@2ndquadrant.com>, PostgreSQL Hackers <pgsql-hackers@postgresql.org>
Date: 2020-02-05T04:12:10Z
Lists: pgsql-hackers

Commits

Same data as JSON: GET /api/v1/messages/:b64id/commits the thread's linked commits as JSON, with link sources. API reference →
  1. Tighten the concurrent abort check during decoding.

  2. Improve hash_create()'s API for some added robustness.

  3. Use HASH_BLOBS for xidhash.

  4. Fix initialization of RelationSyncEntry for streaming transactions.

  5. Remove unused function declaration in logicalproto.h.

  6. Add additional tests to test streaming of in-progress transactions.

  7. Fix inline marking introduced in commit 464824323e.

  8. Add support for streaming to built-in logical replication.

  9. Fix the SharedFileSetUnregister API.

  10. Fix comment in procarray.c

  11. Suppress compiler warning in non-cassert builds.

  12. Extend the BufFile interface.

  13. Mark a few logical decoding related variables with PGDLLIMPORT.

  14. Implement streaming mode in ReorderBuffer.

  15. Extend the logical decoding output plugin API with stream methods.

  16. WAL Log invalidations at command end with wal_level=logical.

  17. Immediately WAL-log subtransaction and top-level XID association.

  18. Allow logical replication to transfer data in binary format.

  19. Only superuser can set sslcert/sslkey in postgres_fdw user mappings

  20. Track statistics for spilling of changes from ReorderBuffer.

  21. Add logical_decoding_work_mem to limit ReorderBuffer memory usage.

  22. logical decoding: process ASSIGNMENT during snapshot build

  23. Emit invalidations to standby for transactions without xid.

Attachments

On Thu, Jan 30, 2020 at 4:11 PM Amit Kapila <amit.kapila16@gmail.com> wrote:
>
> On Fri, Jan 10, 2020 at 10:14 AM Dilip Kumar <dilipbalaut@gmail.com> wrote:
> >
> > On Mon, Jan 6, 2020 at 2:11 PM Amit Kapila <amit.kapila16@gmail.com> wrote:
> > >
> >
> > >
> > > Few more comments:
> > > --------------------------------
> > > v4-0007-Implement-streaming-mode-in-ReorderBuffer
> > > 1.
> > > +ReorderBufferStreamTXN(ReorderBuffer *rb, ReorderBufferTXN *txn)
> > > {
> > > ..
> > > + /*
> > > + * TOCHECK: We have to rebuild historic snapshot to be sure it includes all
> > > + * information about
> > > subtransactions, which could arrive after streaming start.
> > > + */
> > > + if (!txn->is_schema_sent)
> > > + snapshot_now
> > > = ReorderBufferCopySnap(rb, txn->base_snapshot,
> > > + txn,
> > > command_id);
> > > ..
> > > }
> > >
> > > Why are we using base snapshot here instead of the snapshot we saved
> > > the first time streaming has happened?  And as mentioned in comments,
> > > won't we need to consider the snapshots for subtransactions that
> > > arrived after the last time we have streamed the changes?
> > Fixed
> >
>
> +static void
> +ReorderBufferStreamTXN(ReorderBuffer *rb, ReorderBufferTXN *txn)
> {
> ..
> + /*
> + * We can not use txn->snapshot_now directly because after we there
> + * might be some new sub-transaction which after the last streaming run
> + * so we need to add those sub-xip in the snapshot.
> + */
> + snapshot_now = ReorderBufferCopySnap(rb, txn->snapshot_now,
> + txn, command_id);
>
> "because after we there", you seem to forget a word between 'we' and
> 'there'.
Fixed

  So as we are copying it now, does this mean it will consider
> the snapshots for subtransactions that arrived after the last time we
> have streamed the changes? If so, have you tested it and can we add
> the same in comments.
Yes I have tested.  Comment added.
>
> Also, if we need to copy the snapshot here, then do we need to again
> copy it in ReorderBufferProcessTXN(in below code and in catch block in
> the same function).
>
> {
> ..
> + /*
> + * Remember the command ID and snapshot if transaction is streaming
> + * otherwise free the snapshot if we have copied it.
> + */
> + if (streaming)
> + {
> + txn->command_id = command_id;
> + txn->snapshot_now = ReorderBufferCopySnap(rb, snapshot_now,
> +   txn, command_id);
> + }
> + else if (snapshot_now->copied)
> + ReorderBufferFreeSnap(rb, snapshot_now);
> ..
> }
>
Fixed
> > >
> > > 4. In ReorderBufferStreamTXN(), don't we need to set some of the txn
> > > fields like origin_id, origin_lsn as we do in ReorderBufferCommit()
> > > especially to cover the case when it gets called due to memory
> > > overflow (aka via ReorderBufferCheckMemoryLimit).
> > We get origin_lsn during commit time so I am not sure how can we do
> > that.  I have also noticed that currently, we are not using origin_lsn
> > on the subscriber side.  I think need more investigation that if we
> > want this then do we need to log it early.
> >
>
> Have you done any investigation of this point?  You might want to look
> at pg_replication_origin* APIs.  Today, again looking at this code, I
> think with current coding, it won't be used even when we encounter
> commit record.  Because ReorderBufferCommit calls
> ReorderBufferStreamCommit which will make sure that origin_id and
> origin_lsn is never sent.  I think at least that should be fixed, if
> not, probably, we need a comment with reasoning why we think it is
> okay not to do in this case.
Still, the problem is the same because, currently, we are sending
origin_lsn as part of the "pgoutput_begin" message.  Now, for the
streaming transaction,
we have already sent the stream start.  However, we might send this
during the stream commit, but I am not completely sure because
currently,
the consumer of this message "apply_handle_origin" is just ignoring
it.  I have also looked into pg_replication_origin* APIs and they are
used for setting origin id and
tracking the progress, but they will not consume the origin_lsn we are
sending in pgoutput_begin so this is not directly related.

>
> + /*
> + * If we are streaming the in-progress transaction then Discard the
>
> /Discard/discard
Done
>
> > >
> > > v4-0006-Gracefully-handle-concurrent-aborts-of-uncommitte
> > > 1.
> > > + /*
> > > + * If CheckXidAlive is valid, then we check if it aborted. If it did, we
> > > + * error out
> > > + */
> > > + if (TransactionIdIsValid(CheckXidAlive) &&
> > > + !TransactionIdIsInProgress(CheckXidAlive) &&
> > > + !TransactionIdDidCommit(CheckXidAlive))
> > > + ereport(ERROR,
> > > + (errcode(ERRCODE_TRANSACTION_ROLLBACK),
> > > + errmsg("transaction aborted during system catalog scan")));
> > >
> > > Why here we can't use TransactionIdDidAbort?  If we can't use it, then
> > > can you add comments stating the reason of the same.
> > Done
>
> + * If CheckXidAlive is valid, then we check if it aborted. If it did, we
> + * error out.  Instead of directly checking the abort status we do check
> + * if it is not in progress transaction and no committed. Because if there
> + * were a system crash then status of the the transaction which were running
> + * at that time might not have marked.  So we need to consider them as
> + * aborted.  Refer detailed comments at snapmgr.c where the variable is
> + * declared.
>
>
> How about replacing the above comment with below one:
>
> If CheckXidAlive is valid, then we check if it aborted. If it did, we
> error out.  We can't directly use TransactionIdDidAbort as after crash
> such transaction might not have been marked as aborted.  See detailed
> comments at snapmgr.c where the variable is declared.
Done
>
> I am not able to understand the change in
> v8-0011-BUGFIX-set-final_lsn-for-subxacts-before-cleanup.  Do you have
> any explanation for the same?

It appears that in ReorderBufferCommitChild we are always setting the
final_lsn of the subxacts so it should not be invalid.  For testing, I
have changed this as an assert and checked but it never hit.  So maybe
we can remove this change.

Apart from that, I have fixed the toast tuple streaming bug by setting
the flag bit in the WAL (attached as 0012).  I have also extended this
solution for handling the speculative insert bug so old patch for a
speculative insert bug fix is removed. I am also exploring the
solution that how can we do this without setting the flag in the WAL
as we discussed upthread.

-- 
Regards,
Dilip Kumar
EnterpriseDB: http://www.enterprisedb.com