Re: [PoC] Improve dead tuple storage for lazy vacuum
Masahiko Sawada <sawada.mshk@gmail.com>
On Mon, Nov 21, 2022 at 4:20 PM John Naylor <john.naylor@enterprisedb.com> wrote: > > > On Fri, Nov 18, 2022 at 2:48 PM I wrote: > > One issue with this patch: The "fanout" member is a uint8, so it can't hold 256 for the largest node kind. That's not an issue in practice, since we never need to grow it, and we only compare that value with the count in an Assert(), so I just set it to zero. That does break an invariant, so it's not great. We could use 2 bytes to be strictly correct in all cases, but that limits what we can do with the smallest node kind. > > Thinking about this part, there's an easy resolution -- use a different macro for fixed- and variable-sized node kinds to determine if there is a free slot. > > Also, I wanted to share some results of adjusting the boundary between the two smallest node kinds. In the hackish attached patch, I modified the fixed height search benchmark to search a small (within L1 cache) tree thousands of times. For the first set I modified node4's maximum fanout and filled it up. For the second, I set node4's fanout to 1, which causes 2+ to spill to node32 (actually the partially-filled node15 size class as demoed earlier). > > node4: > > NOTICE: num_keys = 16, height = 3, n4 = 15, n15 = 0, n32 = 0, n128 = 0, n256 = 0 > fanout | nkeys | rt_mem_allocated | rt_load_ms | rt_search_ms > --------+-------+------------------+------------+-------------- > 2 | 16 | 16520 | 0 | 3 > > NOTICE: num_keys = 81, height = 3, n4 = 40, n15 = 0, n32 = 0, n128 = 0, n256 = 0 > fanout | nkeys | rt_mem_allocated | rt_load_ms | rt_search_ms > --------+-------+------------------+------------+-------------- > 3 | 81 | 16456 | 0 | 17 > > NOTICE: num_keys = 256, height = 3, n4 = 85, n15 = 0, n32 = 0, n128 = 0, n256 = 0 > fanout | nkeys | rt_mem_allocated | rt_load_ms | rt_search_ms > --------+-------+------------------+------------+-------------- > 4 | 256 | 16456 | 0 | 89 > > NOTICE: num_keys = 625, height = 3, n4 = 156, n15 = 0, n32 = 0, n128 = 0, n256 = 0 > fanout | nkeys | rt_mem_allocated | rt_load_ms | rt_search_ms > --------+-------+------------------+------------+-------------- > 5 | 625 | 16488 | 0 | 327 > > > node32: > > NOTICE: num_keys = 16, height = 3, n4 = 0, n15 = 15, n32 = 0, n128 = 0, n256 = 0 > fanout | nkeys | rt_mem_allocated | rt_load_ms | rt_search_ms > --------+-------+------------------+------------+-------------- > 2 | 16 | 16488 | 0 | 5 > (1 row) > > NOTICE: num_keys = 81, height = 3, n4 = 0, n15 = 40, n32 = 0, n128 = 0, n256 = 0 > fanout | nkeys | rt_mem_allocated | rt_load_ms | rt_search_ms > --------+-------+------------------+------------+-------------- > 3 | 81 | 16520 | 0 | 28 > > NOTICE: num_keys = 256, height = 3, n4 = 0, n15 = 85, n32 = 0, n128 = 0, n256 = 0 > fanout | nkeys | rt_mem_allocated | rt_load_ms | rt_search_ms > --------+-------+------------------+------------+-------------- > 4 | 256 | 16408 | 0 | 79 > > NOTICE: num_keys = 625, height = 3, n4 = 0, n15 = 156, n32 = 0, n128 = 0, n256 = 0 > fanout | nkeys | rt_mem_allocated | rt_load_ms | rt_search_ms > --------+-------+------------------+------------+-------------- > 5 | 625 | 24616 | 0 | 199 > > In this test, node32 seems slightly faster than node4 with 4 elements, at the cost of more memory. > > Assuming the smallest node is fixed size (i.e. fanout/capacity member not part of the common set, so only part of variable-sized nodes), 3 has a nice property: no wasted padding space: > > node4: 5 + 4+(7) + 4*8 = 48 bytes > node3: 5 + 3 + 3*8 = 32 IIUC if we store the fanout member only in variable-sized nodes, rt_node has only count, shift, and chunk, so 4 bytes in total. If so, the size of node3 (ie. fixed-sized node) is (4 + 3 + (1) + 3*8)? The size doesn't change but there is 1 byte padding space. Also, even if we have the node3 a variable-sized node, size class 1 for node3 could be a good choice since it also doesn't need padding space and could be a good alternative to path compression. node3 : 5 + 3 + 3*8 = 32 bytes size class 1 : 5 + 3 + 1*8 = 16 bytes Regards, -- Masahiko Sawada Amazon Web Services: https://aws.amazon.com
Commits
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radixtree: Fix SIGSEGV at update of embeddable value to non-embeddable.
- bb7f195ff788 17.0 landed
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Get rid of anonymous struct
- bf183f168c44 17.0 landed
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Teach radix tree to embed values at runtime
- 0fe5f64367bc 17.0 landed
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Teach TID store to skip bitmap for small numbers of offsets
- f35bd9bf359d 17.0 landed
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Use bump context for TID bitmaps stored by vacuum
- 8a1b31e6e596 17.0 landed
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Fix alignment of stack variable
- 0ea51bac3802 17.0 landed
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Use TidStore for dead tuple TIDs storage during lazy vacuum.
- 667e65aac354 17.0 landed
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Rethink create and attach APIs of shared TidStore.
- 2d8f56dabbfd 17.0 landed
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Fix inconsistent function prototypes with function definitions.
- a0e22ef9114b 17.0 landed
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Fix a calculation in TidStoreCreate().
- 4edb37e322a6 17.0 landed
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Fix potential integer handling issue in radixtree.h.
- 80d5d4937c16 17.0 landed
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Add TIDStore, to store sets of TIDs (ItemPointerData) efficiently.
- 30e144287a72 17.0 landed
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Fix link error for test_radixtree module on Windows
- ab6ae6260372 17.0 landed
- 9552e3ace317 17.0 landed
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Blind attempt to fix ODR violations
- 1f1d73a8b83f 17.0 landed
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Fix incorrect format specifier for int64
- e444ebcb85c0 17.0 landed
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Fix redefinition of typedefs
- ac234e6377dd 17.0 landed
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Add template for adaptive radix tree
- ee1b30f128d8 17.0 landed
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Fix signedness error in 9f225e992 for gcc
- de7c6fe8347a 17.0 landed
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Introduce helper SIMD functions for small byte arrays
- 9f225e992bed 17.0 landed
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Optimize vacuuming of relations with no indexes.
- c120550edb86 17.0 cited
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Add bound check before bsearch() for performance
- bbaf315309ed 14.0 cited
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Allocate consecutive blocks during parallel seqscans
- 56788d2156fc 14.0 cited