Re: [PoC] Improve dead tuple storage for lazy vacuum

Masahiko Sawada <sawada.mshk@gmail.com>

From: Masahiko Sawada <sawada.mshk@gmail.com>
To: John Naylor <johncnaylorls@gmail.com>
Cc: PostgreSQL-development <pgsql-hackers@postgresql.org>, Nathan Bossart <nathandbossart@gmail.com>, Andres Freund <andres@anarazel.de>, Matthias van de Meent <boekewurm+postgres@gmail.com>, Yura Sokolov <y.sokolov@postgrespro.ru>
Date: 2024-02-19T02:01:45Z
Lists: pgsql-hackers
On Fri, Feb 16, 2024 at 12:41 PM John Naylor <johncnaylorls@gmail.com> wrote:
>
> On Fri, Feb 16, 2024 at 10:05 AM Masahiko Sawada <sawada.mshk@gmail.com> wrote:
> > > v61-0007: Runtime-embeddable tids -- Optional for v17, but should
> > > reduce memory regressions, so should be considered. Up to 3 tids can
> > > be stored in the last level child pointer. It's not polished, but I'll
> > > only proceed with that if we think we need this. "flags" iis called
> > > that because it could hold tidbitmap.c booleans (recheck, lossy) in
> > > the future, in addition to reserving space for the pointer tag. Note:
> > > I hacked the tests to only have 2 offsets per block to demo, but of
> > > course both paths should be tested.
> >
> > Interesting. I've run the same benchmark tests we did[1][2] (the
> > median of 3 runs):
> >
> > monotonically ordered int column index:
> >
> > master: system usage: CPU: user: 14.91 s, system: 0.80 s, elapsed: 15.73 s
> > v-59: system usage: CPU: user: 9.67 s, system: 0.81 s, elapsed: 10.50 s
> > v-62: system usage: CPU: user: 1.94 s, system: 0.69 s, elapsed: 2.64 s
>
> Hmm, that's strange -- this test is intended to delete all records
> from the last 20% of the blocks, so I wouldn't expect any improvement
> here, only in the sparse case. Maybe something is wrong. All the more
> reason to put it off...

Okay, let's dig it deeper later.

>
> > I'm happy to see a huge improvement. While it's really fascinating to
> > me, I'm concerned about the time left until the feature freeze. We
> > need to polish both tidstore and vacuum integration patches in 5
> > weeks. Personally I'd like to have it as a separate patch for now, and
> > focus on completing the main three patches since we might face some
> > issues after pushing these patches. I think with 0007 patch it's a big
> > win but it's still a win even without 0007 patch.
>
> Agreed to not consider it for initial commit. I'll hold on to it for
> some future time.
>
> > > 2. Management of memory contexts. It's pretty verbose and messy. I
> > > think the abstraction could be better:
> > > A: tidstore currently passes CurrentMemoryContext to RT_CREATE, so we
> > > can't destroy or reset it. That means we have to do a lot of manual
> > > work.
> > > B: Passing "max_bytes" to the radix tree was my idea, I believe, but
> > > it seems the wrong responsibility. Not all uses will have a
> > > work_mem-type limit, I'm guessing. We only use it for limiting the max
> > > block size, and aset's default 8MB is already plenty small for
> > > vacuum's large limit anyway. tidbitmap.c's limit is work_mem, so
> > > smaller, and there it makes sense to limit the max blocksize this way.
> > > C: The context for values has complex #ifdefs based on the value
> > > length/varlen, but it's both too much and not enough. If we get a bump
> > > context, how would we shoehorn that in for values for vacuum but not
> > > for tidbitmap?
> > >
> > > Here's an idea: Have vacuum (or tidbitmap etc.) pass a context to
> > > TidStoreCreate(), and then to RT_CREATE. That context will contain the
> > > values (for local mem), and the node slabs will be children of the
> > > value context. That way, measuring memory usage and free-ing can just
> > > call with this parent context, and let recursion handle the rest.
> > > Perhaps the passed context can also hold the radix-tree struct, but
> > > I'm not sure since I haven't tried it. What do you think?
> >
> > If I understand your idea correctly, RT_CREATE() creates the context
> > for values as a child of the passed context and the node slabs as
> > children of the value context. That way, measuring memory usage can
> > just call with the value context. It sounds like a good idea. But it
> > was not clear to me how to address point B and C.
>
> For B & C, vacuum would create a context to pass to TidStoreCreate,
> and it wouldn't need to bother changing max block size. RT_CREATE
> would use that directly for leaves (if any), and would only create
> child slab contexts under it. It would not need to know about
> max_bytes. Modifyng your diagram a bit, something like:
>
> - caller-supplied radix tree memory context (the 3 structs -- and
> leaves, if any) (aset (or future bump?))
>     - node slab contexts
>
> This might only be workable with aset, if we need to individually free
> the structs. (I haven't studied this, it was a recent idea)
> It's simpler, because with small fixed length values, we don't need to
> detect that and avoid creating a leaf context. All leaves would live
> in the same context as the structs.

Thank you for the explanation.

I think that vacuum and tidbitmap (and future users) would end up
having the same max block size calculation. And it seems slightly odd
layering to me that max-block-size-specified context is created on
vacuum (or tidbitmap) layer, a varlen-value radix tree is created by
tidstore layer, and the passed context is used for leaves (if
varlen-value is used) on radix tree layer. Another idea is to create a
max-block-size-specified context on the tidstore layer. That is,
vacuum and tidbitmap pass a work_mem and a flag indicating whether the
tidstore can use the bump context, and tidstore creates a (aset of
bump) memory context with the calculated max block size and passes it
to the radix tree.

As for using the bump memory context, I feel that we need to store
iterator struct in aset context at least as it can be individually
freed and re-created. Or it might not be necessary to allocate the
iterator struct in the same context as radix tree.

Regards,

--
Masahiko Sawada
Amazon Web Services: https://aws.amazon.com



Commits

  1. radixtree: Fix SIGSEGV at update of embeddable value to non-embeddable.

  2. Get rid of anonymous struct

  3. Teach radix tree to embed values at runtime

  4. Teach TID store to skip bitmap for small numbers of offsets

  5. Use bump context for TID bitmaps stored by vacuum

  6. Fix alignment of stack variable

  7. Use TidStore for dead tuple TIDs storage during lazy vacuum.

  8. Rethink create and attach APIs of shared TidStore.

  9. Fix inconsistent function prototypes with function definitions.

  10. Fix a calculation in TidStoreCreate().

  11. Fix potential integer handling issue in radixtree.h.

  12. Add TIDStore, to store sets of TIDs (ItemPointerData) efficiently.

  13. Fix link error for test_radixtree module on Windows

  14. Blind attempt to fix ODR violations

  15. Fix incorrect format specifier for int64

  16. Fix redefinition of typedefs

  17. Add template for adaptive radix tree

  18. Fix signedness error in 9f225e992 for gcc

  19. Introduce helper SIMD functions for small byte arrays

  20. Optimize vacuuming of relations with no indexes.

  21. Add bound check before bsearch() for performance

  22. Allocate consecutive blocks during parallel seqscans