Re: [PoC] Improve dead tuple storage for lazy vacuum

Masahiko Sawada <sawada.mshk@gmail.com>

From: Masahiko Sawada <sawada.mshk@gmail.com>
To: John Naylor <johncnaylorls@gmail.com>
Cc: PostgreSQL-development <pgsql-hackers@postgresql.org>, Nathan Bossart <nathandbossart@gmail.com>, Andres Freund <andres@anarazel.de>, Matthias van de Meent <boekewurm+postgres@gmail.com>, Yura Sokolov <y.sokolov@postgrespro.ru>
Date: 2024-03-04T06:05:12Z
Lists: pgsql-hackers

Attachments

On Sun, Mar 3, 2024 at 2:43 PM John Naylor <johncnaylorls@gmail.com> wrote:
>
> On Fri, Mar 1, 2024 at 3:01 PM Masahiko Sawada <sawada.mshk@gmail.com> wrote:
> >
> > On Thu, Feb 29, 2024 at 8:43 PM John Naylor <johncnaylorls@gmail.com> wrote:
>
> > > + ts->rt_context = AllocSetContextCreate(CurrentMemoryContext,
> > > +    "tidstore storage",
> > >
> > > "tidstore storage" sounds a bit strange -- maybe look at some other
> > > context names for ideas.
> >
> > Agreed. How about "tidstore's radix tree"?
>
> That might be okay. I'm now thinking "TID storage". On that note, one
> improvement needed when we polish tidstore.c is to make sure it's
> spelled "TID" in comments, like other files do already.
>
> > > - leaf.alloc = (RT_PTR_ALLOC) MemoryContextAlloc(tree->leaf_ctx, allocsize);
> > > + leaf.alloc = (RT_PTR_ALLOC) MemoryContextAlloc(tree->leaf_ctx != NULL
> > > +    ? tree->leaf_ctx
> > > +    : tree->context, allocsize);
> > >
> > > Instead of branching here, can we copy "context" to "leaf_ctx" when
> > > necessary (those names should look more like eachother, btw)? I think
> > > that means anything not covered by this case:
> > >
> > > +#ifndef RT_VARLEN_VALUE_SIZE
> > > + if (sizeof(RT_VALUE_TYPE) > sizeof(RT_PTR_ALLOC))
> > > + tree->leaf_ctx = SlabContextCreate(ctx,
> > > +    RT_STR(RT_PREFIX) "radix_tree leaf contex",
> > > +    RT_SLAB_BLOCK_SIZE(sizeof(RT_VALUE_TYPE)),
> > > +    sizeof(RT_VALUE_TYPE));
> > > +#endif /* !RT_VARLEN_VALUE_SIZE */
> > >
> > > ...also, we should document why we're using slab here. On that, I
> > > don't recall why we are? We've never had a fixed-length type test case
> > > on 64-bit, so it wasn't because it won through benchmarking. It seems
> > > a hold-over from the days of "multi-value leaves". Is it to avoid the
> > > possibility of space wastage with non-power-of-two size types?
> >
> > Yes, it matches my understanding.
>
> There are two issues quoted here, so not sure if you mean both or only
> the last one...

I meant only the last one.

>
> For the latter, I'm not sure it makes sense to have code and #ifdef's
> to force slab for large-enough fixed-length values just because we
> can. There may never be such a use-case anyway. I'm also not against
> it, either, but it seems like a premature optimization.

Reading the old threads, the fact that using a slab context for leaves
originally came from Andres's prototype patch, was to avoid rounding
up the bytes to a power of 2 number by aset.c. It makes sense to me to
use a slab context for this case. To measure the effect of using a
slab, I've updated bench_radix_tree so it uses a large fixed-length
value. The struct I used is:

typedef struct mytype
{
   uint64  a;
   uint64  b;
   uint64  c;
   uint64  d;
   char    e[100];
} mytype;

The struct size is 136 bytes with padding, just above a power-of-2.
The simple benchmark test showed using a slab context for leaves is
more space efficient. The results are:

slab:
= #select * from bench_load_random_int(1000000);
 mem_allocated | load_ms
---------------+---------
     405643264 |     560
(1 row)

aset:
=# select * from bench_load_random_int(1000000);
 mem_allocated | load_ms
---------------+---------
     527777792 |     576
(1 row)

>
> > > For this stanza that remains unchanged:
> > >
> > > for (int i = 0; i < RT_SIZE_CLASS_COUNT; i++)
> > > {
> > >   MemoryContextDelete(tree->node_slabs[i]);
> > > }
> > >
> > > if (tree->leaf_ctx)
> > > {
> > >   MemoryContextDelete(tree->leaf_ctx);
> > > }
> > >
> > > ...is there a reason we can't just delete tree->ctx, and let that
> > > recursively delete child contexts?
> >
> > I thought that considering the RT_CREATE doesn't create its own memory
> > context but just uses the passed context, it might be a bit unusable
> > to delete the passed context in the radix tree code. For example, if a
> > caller creates a radix tree (or tidstore) on a memory context and
> > wants to recreate it again and again, he also needs to re-create the
> > memory context together. It might be okay if we leave comments on
> > RT_CREATE as a side effect, though. This is the same reason why we
> > don't destroy tree->dsa in RT_FREE(). And, as for RT_FREE_RECURSE(),
>
> Right, I should have said "reset". Resetting a context will delete
> it's children as well, and seems like it should work to reset the tree
> context, and we don't have to know whether that context actually
> contains leaves at all. That should allow copying "tree context" to
> "leaf context" in the case where we have no special context for
> leaves.

Resetting the tree->context seems to work. But I think we should note
for callers that the dsa_area passed to RT_CREATE should be created in
a different context than the context passed to RT_CREATE because
otherwise RT_FREE() will also free the dsa_area. For example, the
following code in test_radixtree.c will no longer work:

dsa = dsa_create(tranche_id);
radixtree = rt_create(CurrentMemoryContext, dsa, tranche_id);
:
rt_free(radixtree);
dsa_detach(dsa); // dsa is already freed.

So I think that a practical usage of the radix tree will be that the
caller  creates a memory context for a radix tree and passes it to
RT_CREATE().

I've attached an update patch set:

- 0008 updates RT_FREE_RECURSE().
- 0009 patch is an updated version of cleanup radix tree memory handling.
- 0010 updates comments in tidstore.c such as replacing "Tid" with "TID".
- 0011 rename TidStore to TIDSTORE all places.
- 0012 update bench_radix_tree so it uses a (possibly large) struct
instead of uint64.

Regards,

--
Masahiko Sawada
Amazon Web Services: https://aws.amazon.com

Commits

  1. radixtree: Fix SIGSEGV at update of embeddable value to non-embeddable.

  2. Get rid of anonymous struct

  3. Teach radix tree to embed values at runtime

  4. Teach TID store to skip bitmap for small numbers of offsets

  5. Use bump context for TID bitmaps stored by vacuum

  6. Fix alignment of stack variable

  7. Use TidStore for dead tuple TIDs storage during lazy vacuum.

  8. Rethink create and attach APIs of shared TidStore.

  9. Fix inconsistent function prototypes with function definitions.

  10. Fix a calculation in TidStoreCreate().

  11. Fix potential integer handling issue in radixtree.h.

  12. Add TIDStore, to store sets of TIDs (ItemPointerData) efficiently.

  13. Fix link error for test_radixtree module on Windows

  14. Blind attempt to fix ODR violations

  15. Fix incorrect format specifier for int64

  16. Fix redefinition of typedefs

  17. Add template for adaptive radix tree

  18. Fix signedness error in 9f225e992 for gcc

  19. Introduce helper SIMD functions for small byte arrays

  20. Optimize vacuuming of relations with no indexes.

  21. Add bound check before bsearch() for performance

  22. Allocate consecutive blocks during parallel seqscans